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| start [2024/11/14 13:29] – [Data Upload] strich | start [2025/11/12 12:07] (current) – strich | ||
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| * [[Packages]] | * [[Packages]] | ||
| * [[Pathway Prediction]] | * [[Pathway Prediction]] | ||
| + | * [[Pathway Prediction in Batch Mode]] | ||
| + | * [[PFAS Resources]] | ||
| * [[Relative Reasoning]] | * [[Relative Reasoning]] | ||
| * [[Settings]] | * [[Settings]] | ||
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| * [[License]] | * [[License]] | ||
| * [[Review]] | * [[Review]] | ||
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| * [[Compound]] | * [[Compound]] | ||
| - | *[[ Reaction]] | + | * [[Reaction]] |
| * [[Rule]] | * [[Rule]] | ||
| * [[Pathway]] | * [[Pathway]] | ||
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| * [[Search]] | * [[Search]] | ||
| - | ==== Data Upload ==== | ||
| - | We are working to upload biotransformation pathways in a quick and efficient manner using an excel workbook. If you want to add your data to a future reviewed package, please fill out this template | + | |
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| + | ==== Associated Resources ==== | ||
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| + | [[https://github.com/MSM-group/ContaHMM?tab=readme-ov-file# | ||
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| + | We present a dataset and HMMs (Hidden Markov Models) for biotransformation-related bacterial genes, compiled from existing databases and enhanced by extensive metadata collection, manual curation, and HMM generation.This collection aims to facilitate the annotation of biotransformation-related enzymes and expand the known examples in the field. | ||
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start.1731590992.txt.gz · Last modified: 2024/11/14 13:29 by strich